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Files set as read-only on cloned disk

I cloned my Windows 11 disk to another internal hard disk. Shutdown, removed the old disk and booted into the new one with no problems. However, I ran an installer which failed and when I investigated, I realised that most of the files on the cloned disk are set to read-only, including what looks like all of the Program Files directories and also AppData/Local/Temp, which is what the installer was trying to access. This doesn't seem correct but before I try and reset all of them from powershell, I wondered if I need to do something with Backupper to unlock these files?
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